DisGeNET - a database of gene-disease associations

List of associated variants

Parkinson Disease, C0030567

Source: GWASDB ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs7215239	LINC02210-CRHR1	1.000	0.040	17	45690407	intron variant	T/C	snv		0.30	3
rs16940665	MAPT-AS1 ; LINC02210-CRHR1 ; CRHR1	1.000	0.040	17	45830530	stop lost	T/C	snv	0.15	0.14	2
rs17649641	MAPT ; LOC105371800	0.925	0.120	17	45920006	intron variant	T/C	snv		0.14	2
rs17770343	MAPT-AS1 ; MAPT	1.000	0.040	17	45892788	intron variant	T/C	snv		0.14	2
rs1876829	LINC02210-CRHR1 ; MAPT-AS1 ; CRHR1	1.000	0.040	17	45834077	intron variant	T/C	snv	0.15	0.14	2
rs10877840	SLC2A13	1.000	0.040	12	39959194	intron variant	T/C	snv		0.19	1
rs11931532	BST1	1.000	0.040	4	15724143	intron variant	T/C	snv		0.13	1
rs12150390	MAPT-AS1 ; LINC02210-CRHR1 ; CRHR1	1.000	0.040	17	45818862	intron variant	T/C	snv		0.14	1
rs12938476	LOC107985028 ; LINC02210-CRHR1	1.000	0.040	17	45735531	intron variant	T/C	snv		0.40	1
rs1372520	SNCA ; SNCA-AS1	1.000	0.040	4	89836354	intron variant	T/C	snv		0.78	1
rs1526123	LINC02210-CRHR1	1.000	0.040	17	45705974	intron variant	T/C	snv		0.55	1
rs17497526	LOC105378347 ; COL13A1	1.000	0.040	10	69820364	intron variant	T/C	snv		6.0E-02	1
rs2316765	MAPT-AS1 ; LINC02210-CRHR1 ; CRHR1	1.000	0.040	17	45835088	3 prime UTR variant	T/C	snv		0.14	1
rs2737029	SNCA	1.000	0.040	4	89790619	intron variant	T/C	snv		0.45	1
rs356188	SNCA	1.000	0.040	4	89770386	intron variant	T/C	snv		0.21	1
rs356200	SNCA	0.882	0.160	4	89747463	intron variant	T/C	snv		0.44	1
rs356204	SNCA	1.000	0.040	4	89742391	intron variant	T/C	snv		0.44	1
rs370	EEF1DP3 ; FRY	1.000	0.040	13	31908207	intron variant	T/C	snv		0.93	1
rs4248166	TSBP1-AS1 ; BTNL2	1.000	0.040	6	32398644	intron variant	T/C	snv		0.18	1
rs4409766	BORCS7-ASMT ; BORCS7	1.000	0.040	10	102856906	intron variant	T/C	snv		0.14	1
rs4482334	MAPT-AS1 ; CRHR1 ; LINC02210-CRHR1	1.000	0.040	17	45835464	3 prime UTR variant	T/C	snv		0.14	1
rs4525537	CRHR1 ; LINC02210-CRHR1 ; MAPT-AS1	1.000	0.040	17	45835357	3 prime UTR variant	T/C	snv		0.14	1
rs482912	LAMP3	1.000	0.040	3	183135882	missense variant	T/C	snv	0.65	0.59	1
rs4837628	BRINP1	1.000	0.040	9	119297431	intron variant	T/C	snv		0.48	1
rs7077361	ITGA8	1.000	0.040	10	15519544	intron variant	T/C	snv		0.11	1